As regulatory activities in the last fifteen years have sharply c

As regulatory activities in the last fifteen years have sharply curtailed tobacco selleckchem KPT-330 advertising in traditional venues (e.g., restricting magazine advertising), POP promotion has become the dominant medium for tobacco advertising, representing 81% of the tobacco industry��s total marketing expenditures in 2006 (Federal Trade Commission [FTC], 2009; Wakefield et al., 2002). Nevertheless, youth continue to be exposed to magazine advertisements, particularly for brands that appeal most to youth (i.e., Marlboro, Camel, and Newport; O��Connor, 2005). Similarly, nearly half of popular movies still contain tobacco imagery (Glantz, Titus, Mitchell, Polansky, & Kaufmann, 2010). Smoking is also portrayed in nearly one fourth of all music videos (Durant et al.

, 1997), 19% of prime-time television shows (Christenson, Henriksen, & Roberts, 2000), and 24% of popular songs (Primack, Dalton, Carroll, Agarwal, & Fine, 2008). Many websites sell tobacco products, and few employ effective age verification procedures (Jenssen, Kleinn, Salazar, Daluga, & DiClemente, 2009). Youth are also exposed to tobacco imagery through online videos and social networking sites (Moreno, Parks, Zimmerman, Brito, & Christakis, 2009), and these emerging technologies provide new opportunities for exposure to tobacco advertising (American Academy of Pediatrics, 2010). All these channels work together to promote cigarette use; considering only some of them may mischaracterize the extent to which youth are exposed to protobacco marketing and media.

In this complex rapidly shifting marketing environment and media landscape, there is an urgent need to develop measurement approaches that more precisely capture total exposure to tobacco promotion and its effects. Detailed information on exposure is essential for understanding the mechanisms responsible for observed links between tobacco promotion and youth smoking and to develop effective tobacco use prevention programs. Ecological momentary assessment (EMA) is a method of real-time data collection that has significant potential to provide detailed information on exposure to tobacco advertising. Though based on participant��s self-report, EMA data are collected in ��real time,�� at the moment when participants are exposed to a stimulus or engaged in an activity (Shiffman, Stone, & Hufford, 2008).

EMA can provide ecologically valid information about Cilengitide the mix of protobacco media messages to which youth are exposed, a breakdown of intensity of exposure to different marketing and media channels, and allow a detailed analysis of the types of messages targeted at different segments of the population. Because EMA consists of frequent repeated measurements, it provides a movie-like view of processes rather than the static snapshot provided by a cross-sectional design or the few infrequent snapshots provided by a prospective design.

9%) was infused for 5 min Then the catheter was withdrawn and th

9%) was infused for 5 min. Then the catheter was withdrawn and the common hepatic duct clamp was removed. The duodenal puncture closed by a purse-string suture (7-0 monofilament). The traction sutures were removed and abdomen was closed in two layers. Animals were allowed to wake up and given JQ1 structure free access to food and water. Sham-operated animals underwent the same procedure without any infusion into the pancreas. Vehicle or the Rho-kinase inhibitor, Y-27632 [(R)-(+)-trans-N-(4-pyridyl)-4-(1-aminoethyl)-cyclohexanecarboxamide; Calbiochem, San Diego, USA], was given (0.5�C5 mg?kg?1) i.p. 30 min prior to bile duct cannulation. In separate experiments animals were treated with 5 mg?kg?1 Y-27632 2 h after taurocholate challenge. Animals were killed 24 h after the induction of pancreatitis.

One group of mice received 5 mg?kg?1 Y-27632 alone without bile duct cannulation. Blood was collected from the tail vein for systemic leucocyte differential counts and determination of blood amylase levels. Blood samples were also collected from the inferior vena cava for flow cytometric studies of neutrophils. Pancreatic tissue was removed and kept in two pieces; one piece was snap-frozen in liquid nitrogen for biochemical analysis of myeloperoxidase (MPO), trypsinogen activating peptide (TAP) and MIP-2 and the other piece was fixed in formalin for later histological analysis. Systemic leucocyte counts Tail vein blood was mixed with Turks solution (0.2 mg gentian violet in 1 mL glacial acetic acid, 6.25% v/v) in a 1:20 dilution. Leucocytes were identified as monomorphonuclear (MNLs) and polymorphonuclear (PMNLs) cells in a Burker chamber.

Blood amylase Amylase was quantified in blood with a commercially available assay (Reflotron?, Roche Diagnostics GmbH, Mannheim, Germany). MPO assay Frozen pancreatic tissue was preweighed and homogenized in 1 mL mixture (4:1) with phosphate-buffered saline and aprotinin 10 000 KIE mL?1 (Trasylol?, Bayer HealthCare AG, Leverkusen, Germany) for 1 min. The homogenate was centrifuged (15339��g, 10 min) and the supernatant was stored at ?20��C and the pellet was used for MPO assay as previously described (Laschke et al., 2007). In brief, the pellet was mixed with 1 mL of 0.5% hexadecyltrimethylammonium bromide. Next, the sample was frozen for 24 h and then thawed, sonicated for 90 s, put in a water bath set at 60��C for 2 h, after which the MPO activity of the supernatant was measured.

The enzyme activity was determined spectrophotometrically as the MPO-catalyzed change in absorbance in the redox reaction of H2O2 (450 nm, with a reference filter 540 nm, 25��C). Values are expressed as MPO units g?1 tissue. Dacomitinib Flow cytometry For analysis of Mac-1 and CXCR2 expression on circulating neutrophils, blood was collected into syringes prefilled with 1:10 acid citrate dextrose at 24 h post taurocholate challenge.

The two patients received oral imatinib therapy after cytoreducti

The two patients received oral imatinib therapy after cytoreductive surgery, and revealed no residual disease for a long-term period of time. Although more studies are needed to confirm whether cytoreductive surgery is additive to imatinib treatment, our results were very encouraging in this regard. Therefore, in patients Nilotinib Leukemia with far advanced or recurring GISTs, improved survival could be expected by imatinib oral therapy after removal of tumors as much as possible. In far advanced or severely metastasized patients, neoadjuvant therapy commonly enables curative surgical resection. Indeed, neoadjuvant therapy with imatinib for treatment of malignant GISTs is able to increase the rate of complete cytoreductive surgery.

There are several reports of neoadjuvant imatinib chemotherapy therapy used to treat primary unresectable GISTs, allowing them to be resected completely. However, resistance is commonly observed after neoadjuvant imatinib therapy, and surgical intervention should always be considered in neoadjuvant therapy group, since the duration of neoadjuvant chemotherapy and an optimal time for surgery are decisive factors.16 Even after complete resection of primary tumor, more than half of patients experience recurrence of tumors. And the first site of recurrence is usually limited in the abdomen, even though recurrent GISTs have a multifocal nature.17 However, complete resection can be achieved only in less than half of patients. Thus, patients should be followed up regularly from early period after resection of the primary tumor, because an early detection of metastasis could possibly increase complete cytoreduction of the recurrent tumor burden.

Furthermore, this complete cytoreduction followed by imatinib therapy might be able to improve the survival of patients with recurrent GISTs.
AIM: To evaluate the feasibility and efficacy of percutaneous radiofrequency ablation (RFA) of the feeding artery of hepatocellular carcinoma (HCC) in reducing the blood-flow-induced heat-sink effect of RFA. METHODS: A total of 154 HCC patients with 177 pathologically confirmed hypervascular lesions participated in the study and were randomly assigned into two groups. Seventy-one patients with 75 HCCs (average tumor size, 4.3 �� 1.

1 cm) were included in group A, in which the feeding artery of HCC was identified by color Doppler flow imaging, and were ablated with multiple small overlapping RFA foci [percutaneous ablation of feeding artery (PAA)] before routine RFA treatment of the tumor. Eighty-three patients with Dacomitinib 102 HCC (average tumor size, 4.1 �� 1.0 cm) were included in group B, in which the tumors were treated routinely with RFA. Contrast-enhanced computed tomography was used as post-RFA imaging, when patients were followed-up for 1, 3 and 6 mo. RESULTS: In group A, feeding arteries were blocked in 66 (88%) HCC lesions, and the size of arteries decreased in nine (12%).

Braun, Melsungen, Germany) and ethiodized oil (Lipiodol Ultraflui

Braun, Melsungen, Germany) and ethiodized oil (Lipiodol Ultrafluide; Guerbet, Villepinte, France) as an embolic agent. Secondly in case of TACE a mixture of doxorubicin and ethiodized oil (Lipiodol www.selleckchem.com/products/MDV3100.html Ultrafluide; Guerbet, Villepinte, France) as an embolic agent was used. TAE/TACE was performed superselectively by occluding only the tumor-feeding segmental arteries or selectively by occluding the right or left hepatic artery. In general, a superselective embolization was aimed. However, in patients with a large tumour mass or more than one nodule in the same lobe, selective embolization of the entire lobe was performed. In patients with tumor disease in both the right and the left liver lobe, only one lobe was embolized during one treatment session to avoid a prolonged postembolization syndrome or postinterventional liver failure.

A completion arteriogram was obtained to confirm occlusion of the embolized vessels. After TAE/TACE, the patients were carefully observed and side-effects of embolization were treated symptomatically. Follow-up was done with contrast-enhanced CT of the liver to assess the effect of embolization on the tumor. Depending on success of the already performed interventions embolization sessions were repeated in intervals from 1 to 3 months. Multimodal therapy Multimodal therapy (n = 17) included a combination of local ablative therapies such as percutaneous ethanol instillation (PEI), radiofrequency ablation therapy or cryotherapy on the one hand and transarterial embolization therapy as described above on the other hand.

Usually percutaneous ablative therapies were given first, after signs of tumour progression were seen treatment was continued with TAE/TACE. Palliative care 39 patients received only symptomatic therapy but no active treatment for hepatocellular carcinoma. Patients in this group rejected the offered local ablative therapies, embolization therapy or systemic treatment but opted for palliative care only. Statistical analysis Chi2 test was used to compare proportions and Mann Whitney U tests to compare median values between groups. Survival times were estimated using the Kaplan-Meier method and the differences were tested with the log-rank test. Analysis was performed with Statistica (StatSoft, Inc. (2004). STATISTICA (data analysis software system), version 6. http://www.statsoft.com).

Results Patients with BCLC stage A 40 patients were classified to BCLC stage A. Treatment modalities in this group were: long-acting octreotide [Sandostatin LAR] (n = 11 [27.5%]), TACE (n = 5 [12.5%]), multimodal therapy as defined above (n = 7 [17.5%]) and palliative care only (17 [42.5%]). Median Survival (Figure (Figure11) Figure 1 Patients with hepatocellular carcinoma and BCLC stage A. Median survival rates in long-acting octreotide [Sandostatin LAR], TACE, multimodal therapy and palliative care were 31.4, 37.3, 40.2 and 15.1 months respectively. Survival rates of patients with … Overall median survival was GSK-3 18.

38 The overall approach for developing this prognostic profile

38 The overall approach for developing this prognostic profile merely was distinct from that used in the development of the previously discussed Oncotype DX assay, which was derived from a set of 250 preselected candidate genes believed to have prognostic importance in hormone-receptor-positive breast cancer. MammaPrint has been shown to be a prognostic marker, independent of conventional clinical and pathologic factors such as tumor size, hormone receptor status, and HER2 status. MammaPrint was cleared for use by the FDA in 2007, and at publication, was the only FDA-approved breast cancer genomic assay. The biological functions of the 70 genes in the MammaPrint signature are associated with the essential steps necessary for tumor progression and metastasis.

These genes are the hallmarks of cancer-related biology, regulating cell cycle, invasion, metastasis, proliferation, local invasion, survival in circulation, extravasation, and adaptation to the micro-environment as well as angiogenesis. They reflect the acquired malignant characteristics of a cancer cell along with tumor progression and metastasis-related biological activities.39 The MammaPrint signature was designed based on overall expression levels to divide patients into low and high risk groups that correspond with 10-year distant metastasis-free survival rates of >90% or <90%, respectively, in the original datasets involving breast cancer patients who underwent surgery alone without any systemic therapy. MammaPrint was first validated in a series of 295 consecutive invasive breast tumors from patients with early stage breast cancer who were all part of the tumor bank at the Netherlands Cancer Institute (NKI).

The 70-gene profile was found to be a strong independent predictor of clinical outcome, and added to the predictive power of standard clinical-pathologic parameters.40 In a multivariate analysis, MammaPrint was the strongest predictor of 10-year distant metastasis-free survival with a hazard ratio of 4.6 (95% CI, 2.3�C9.2).40 The second Dacomitinib independent validation study for MammaPrint was performed by the TRANSBIG Consortium.41 The 5 participating European hospitals evaluated 302 patients who had received loco-regional therapy but no systemic adjuvant therapy. The median follow-up in this dataset was 13.6 years. The median distant metastasis-free survival at 10 years was 90% and 69% for low- and high-risk groups, respectively.42 On multivariate analysis, MammaPrint was found to provide independent prognostic information beyond what could be determined from patient age, tumor grade, size, or hormone receptor status in a population of node-negative breast cancer patients, none of whom had received any adjuvant endocrine or chemotherapy.

Because the driving force ([A]1 ? [A]2) remained virtually unchan

Because the driving force ([A]1 ? [A]2) remained virtually unchanged in the course of the described experiments, the relative changes in F correspond to similar changes in P. Cell culture. Pulmonary microvascular endothelial cells (PMEC) were isolated Ganetespib OSA as described by Lips et al. (26) with Dynabeads coated with Bandeiraea simplicifolia lectin. HL-1 cells were kindly provided by Dr. W. C. Claycomb (Louisiana State University Health Science Center, New Orleans, LA). NIH3T3 fibroblasts were from the German Resource Center for Biological Material (DSMZ, Braunschweig, Germany). NS20Y cells were from PAA (Pasching, Austria) and HMVEC-L from Lonza (Basel, Swizerland). For hypoxia experiments, cells were exposed for 6 h to either normoxia (21% O2, 5% CO2, 74% N2) or hypoxia (1% O2, 5% CO2, 94% N2).

RNA isolation and real-time RT-PCR. Total RNA was isolated with the RNeasy mini kit (Qiagen, Hilden, Germany), and genomic DNA was removed by treatment with DNase (Invitrogen, Karlsruhe, Germany). Superscript RNase H? reverse transcriptase was used for reverse transcription. Real-time quantitative PCR was performed as described by Pfeil et al. (31). Primer sequences are specified in Table 1. Sequencing of the PCR products was done by MWG Biotech (Ebersberg, Germany). Table 1. Primers used for RT-PCR Analysis of intermedin gene promoter reporter activity. IMD gene sequences from human and mouse were retrieved from GenBank and analyzed with the TRANSFAC database and Perl-based scripts. A luciferase reporter construct, pGL2�C2.7 kb IMD promoter-luc (pGL2-Enhancer luciferase vector, Promega, Mannheim, Germany), which contains a 2.

7 kb (?1 ~ ?2650) proximate region of mouse IMD gene promoter, was cotransfected with a HIF-1�� expression construct (GeneCopoeia, Germantown, MD) in HEK293T cells. Cells were transfected with 4 ��g of pGL2�C2.7 kb IMD promoter-luc plasmid, together with 2, 4, 8, or 16 ��g of the HIF-1�� expression vector plasmid, by the calcium phosphate precipitation method. Five-hundred nanograms of a pCMV-��-galactosidase vector were cotransfected to monitor transfection efficiency. The reporter activity is expressed as the ratio of relative luciferase unit to ��-galactosidase activity. RESULTS IMD is expressed by pulmonary endothelial cells. The library screen identified nine antibody clones that recognized IMD, but not AM, in ELISA.

Two of these (clones “type”:”entrez-protein”,”attrs”:”text”:”AbD06980.1″,”term_id”:”86572423″,”term_text”:”ABD06980.1″AbD06980.1 and “type”:”entrez-protein”,”attrs”:”text”:”AbD06988.1″,”term_id”:”86572431″,”term_text”:”ABD06988.1″AbD06988.1) were suitable for immunofluorescence GSK-3 labeling of formaldehyde-fixed tissue. Specificity of these anti-IMD antibodies was shown in dot blot and Western blot analysis.

, 2009) This study has limitations, such as those related to the

, 2009). This study has limitations, such as those related to the measurement of tobacco Tofacitinib FDA use. Although the ASSIST is a valid and reliable screening instrument, it is not a routinely used tobacco use measure, and therefore, comparisons with other studies are difficult. For example, the ASSIST assesses general tobacco use (cigarettes, pipes, chewing tobacco, and cigars combined), while the CHIS statewide survey assesses cigarette smoking specifically. Therefore, the differences in use between patients and the general population described in this study may be overestimated. On the other hand, the use of tobacco products other than cigarettes is relatively low in California (Al-Delaimy et al., 2008); therefore, we think that the differences we report are useful.

In addition, differences in the wording of the ED interview items and those on the statewide survey required us to make some assumptions of equivalence. For example, the lifetime use item in the ED interview was, ��In your lifetime, have you ever used tobacco products.�� In the CHIS sample, the item was, ��Altogether, have you smoked at least 100 or more cigarettes in your entire lifetime?�� However, although we believe that the lack of comparability between the ED measures and the CHIS measures is a concern, the very large differences seen give us confidence that the finding of ED patients having considerably higher tobacco use is real and of public health significance for targeted interventions.

Another measurement shortcoming was the lack of widely-used measures of cigarette use and addiction��number of cigarettes smoked, the latency to first cigarette of the day, the smoking of mentholated cigarettes, and more detailed cessation history items��all measures that have shown Black�CWhite differences in other studies (Muscat et al., 2002; Okuyemi et al., 2004). Another important covariate, socioeconomic status, was not reliable and therefore not included in our models. A sensitive reliable socioeconomic measure would be important to include because of its likely association with race/ethnicity and health behaviors. The present ED data were not collected specifically for tobacco research but rather came from opportunistic screenings primarily for alcohol and drug misuse. Although the number of involved EDs reflected an impressive representation of all County EDs and the sample size of patients was large, the present study used a convenience sample rather than a probability sample.

Health interviewers attempted universal screening of all capable patients; however, to the degree that the sample does not represent all patients in the area, we cannot assume that the findings are generalizable to all ED patients. Finally, for the purpose of confidentiality and rapport building, Dacomitinib HEs avoided asking patients about their immigration status and their insurance coverage, thereby limiting our ability to describe and analyze data by these characteristics.

An N-fold value of <0 6 was considered deleted

An N-fold value of <0.6 was considered deleted. selleck Belinostat All PCRs were performed on a LightCycler 480 with the LightCycler 480 SYBR Green I Master kit (Roche Applied Science, Basel, Switzerland). PCR conditions and primer sequences are available on request. Experiments were done with triplicates for each data point. Microarray characterization of ABCB4 complete deletions The practical aspects of array-comparative genomic hybridization (array-CGH) are described in detail elsewhere.39 Briefly, array-CGH labeling and hybridization were performed on Agilent whole human genome 400K microarrays as recommended in the Agilent manual (Protocol v6.3, October 2010, Agilent Technologies, Palo Alto, CA, USA). Patients’ genomic DNA and six pooled normal control DNAs (reference) were labeled with Cy5-dUTP and Cy3-dUTP, respectively.

Arrays were scanned with an Agilent DNA Microarray Scanner (G2565BA). Log2 ratios were determined with Agilent Feature Extraction software (v 9.1.3.1). Results were visualized and analyzed with Agilent’s Genomic Workbench 5.0 software. DNA sequence information was referred to the public UCSC (University of California Santa Cruz) database (Human Genome Browser, February 2009 assembly: hg 19, National Center for Biotechnology Information (NCBI) Build 37). Fine characterization of ABCB4 intragenic deletion breakpoints Long-range PCR was performed with the Expand 20kb Plus PCR kit as recommended by the manufacturer (Roche Applied Science). The primer pairs and PCR conditions used to characterize the gross deletions are available upon request.

The PCR products were sequenced with the ABI BigDye terminator sequencing kit (Applied Biosystems) on an ABI Carfilzomib Prism 3130 automatic DNA sequencer (Applied Biosystems). Results In all, 102 index cases with LPAC and ICP/CIC were screened on the basis of their phenotype for mutations in the ABCB4 gene. A total of 32 ABCB4 heterozygous loss of function point or short insertion/deletion mutations (including non-sense, frameshift, splice, or previously reported/predicted to be deleterious missense mutations) were identified among the 102 tested index cases: in 37% (16/43) of LPAC patients and in 27% (16/59) of ICP/CIC patients. The 70 adult patients with no ABCB4 mutation found (27 with LPAC and 43 with ICP/CIC), were consequently screened for large rearrangements using MLPA. Four heterozygous deletions were identified with this approach in 7% (3/43) of the LPAC patients (BOC propositus of family 1, BEA propositus of family 2, and TIL) and in ~2% (1/59) of the ICP/CIC patients (ROC) (Figure 1). The four deletions were confirmed using real-time PCR-based gene dosage.

36 Quantification of bone resorption by serum PINP Serum samples

36 Quantification of bone resorption by serum PINP Serum samples were collected from all patients and stored at ?40 ��C until analysis. The concentration of PINP fragments was measured by the newly developed selleck chem competitive ELISA assay for human N-terminal propetide of collagen type I (Nordic Bioscience, Herlev, Denmark). The assay was run using 20 ��l undiluted serum samples in a one-step ELISA 1 hour at 4 ��C using a horse radish labeled monoclonal antibody against a 10 amino acid sequence in the N-terminal pro-peptide of collagen type I.30 Mean intra-variation on 10 independent runs was 4.4% on double determinations. Mean inter-variation on 10 independent runs was 5.4% on double determination. Dilution recovery was 90%�C114% on 10 normal serum samples representing the entire range of the standard curve.

30 Bone resorption and number of osteoclasts Data on the collagen type I bone resoption markers �¦�CTX-I32 (assessing resorption of aged collagen type I) and ����CTX-I31 (resorption of newly synthesized collagen type I) and the marker for the number of osteoclasts (TRACP5b) have been published previously by our group15 and these data were used for correlations to the bone formation marker, PINP, detected in serum. The correlation between the CTX-I/TRACP5b ratio, and PINP, was used to indicate resorption activity per osteoclasts versus bone formation. Statistical analysis The values of each of the biochemical markers were logarithmically transformed to obtain normality. Comparisons between the level of PINP in patients with different cancer types without BM was performed by analysis of variance (ANOVA) using the General Linear Models Procedure (GLM).

The same statistical procedure was used for comparison of PINP levels in patients without and with BM for each cancer type. In the comparison of the PINP levels for each Soloway score against the level in patients without metastasis, the Dunnett��s adjustment of Entinostat the level of significance was employed to correct for multiple comparisons. Correlations between the biochemical markers were determined using Spearmans Rho. Differences and associations were considered statistically significant if P < 0.05. GRAPH PAD PRISM 5 (Graph Pad Software, La Jolla, CA, USA) was used for calculations. Results PINP related to bone cancer type Demographics of 161 cancer patients stratified according to cancer type and the presence or absence of BM have previously been reported.15 There were no statistically significant differences in age and BMI between patients with or without BM. Figure 1 shows the mean values of serum PINP in patients stratified according to cancer type and presence or absence of BM.

Application to the NIEHS (necrosis, cross-tissue) data set For th

Application to the NIEHS (necrosis, cross-tissue) data set For the forward prediction, from blood to liver, the application of different batch effect removal selleck kinase inhibitor methods generally does not appear to affect the prediction performance. The backward prediction, from liver to blood, has poor prediction performance with or without the application of batch effect removal algorithms (Figure 8). This may in part be due to the fact that although blood gene signatures can be used to effectively predict liver necrosis, liver gene signatures do not have predictive power for necrosis measured in blood. This finding is consistent with the observations reported by Huang et al.

14 Application to the NIEHS (necrosis, cross-tissue-cross-platform) data set Without batch (group) effect removal, there is no predictive power either from blood (Agilent) to liver (Affymetrix), or vice versa, noting that all the MCC values are either zero or negative (Figure 9). In using data from blood (Agilent) to predict liver injury (Affymetrix), the applications of most batch effect removal methods enhance the prediction performance except the W-S combination for Refseq and Unigene mapping. When using data from liver (Affymetrix) to predict appropriate blood-based genes (Agilent), the application of batch effect removal methods yields both increased and decreased prediction performance. However, the two ratio-based methods consistently outperform the other methods. Similar to the cross-tissue results, we see that the blood samples have strong predictability of the liver necrosis with proper batch effect removal.

However, the predictability is much weaker for backward prediction, from liver to blood. In general, the sequence mapping slightly outperforms the other two mappings. Meta analysis To evaluate the general impact of batch effect removal in cross-batch (group) prediction performance, we calculate the increase of prediction performance value MCC after batch effect removal ��MCC=MCCAfter?MCCBefore. If ��MCC is greater than or lower than a threshold value, we say the batch effect removal has a positive or negative impact on the performance, respectively. If the difference in MCC after and GSK-3 before batch impact removal is less than the threshold, we say the impact is negligible. For simplicity, the threshold is chosen as 0.05. Figure 10 shows the percentages of cases with increased, decreased and unchanged predictive performances (with sum 100%) over the 120 cases explored. We find that, for each batch effect removal method, the number of cases with increased predictive performance is greater than that with decreased predictive performance, indicating that, in general, batch effect removal has a positive impact on prediction performance.